Photobacterium aquae strain CGMCC 1.12159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquae strain CGMCC 1.12159 is characterized by the presence of flagella, which suggests motility in aquatic environments. This trait is essential for the organism's ability to navigate and respond to its surroundings, potentially aiding in nutrient acquisition and colonization. Genetically, Photobacterium aquae strain CGMCC 1.12159 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession LDOT00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella and the singular replicon suggest that Photobacterium aquae strain CGMCC 1.12159 may be well-suited for survival in dynamic aquatic habitats, where mobility and genetic stability are advantageous. This adaptability can play a crucial role in its ecological interactions, including potential symbiotic relationships with other microorganisms or participation in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquae
Strainstrain CGMCC 1.12159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquae strain CGMCC 1.12159 contig0114, whole genome

Gene Summary

Adenine Count

1296295 bp

Thymine Count

1288539 bp

Guanine Count

1235732 bp

Cytosine Count

1258169 bp

Genome Length

5078735 bp

Protein-coding Genes

4342 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein pilzABT56_15150Not AvailableNegative3410837 - 341319190390.5
dna repair protein radaABT56_15155Not AvailablePositive3413334 - 341472549121.7
abc transporter atp-binding proteinABT56_15160Not AvailableNegative3414819 - 341648662502.1
hypothetical proteinABT56_15165Not AvailableNegative3416605 - 34168026860.37
lytic transglycosylaseABT56_15170Not AvailablePositive3416855 - 341878673737.2
trp operon repressorABT56_15175Not AvailablePositive3418855 - 341916911946.2
inositol monophosphataseABT56_15180Not AvailableNegative3419239 - 341976918803.5
xre family transcriptional regulatorABT56_15185Not AvailableNegative3420059 - 342069723518.7
peptidase m20ABT56_15190Not AvailableNegative3421321 - 342242739484.0
uridine phosphorylaseABT56_15195Not AvailableNegative3422644 - 342336926089.0

Displaying genes 2951 – 2960 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.