Photobacterium aquae strain CGMCC 1.12159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquae strain CGMCC 1.12159 is characterized by the presence of flagella, which suggests motility in aquatic environments. This trait is essential for the organism's ability to navigate and respond to its surroundings, potentially aiding in nutrient acquisition and colonization. Genetically, Photobacterium aquae strain CGMCC 1.12159 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession LDOT00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella and the singular replicon suggest that Photobacterium aquae strain CGMCC 1.12159 may be well-suited for survival in dynamic aquatic habitats, where mobility and genetic stability are advantageous. This adaptability can play a crucial role in its ecological interactions, including potential symbiotic relationships with other microorganisms or participation in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquae
Strainstrain CGMCC 1.12159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquae strain CGMCC 1.12159 contig0114, whole genome

Gene Summary

Adenine Count

1296295 bp

Thymine Count

1288539 bp

Guanine Count

1235732 bp

Cytosine Count

1258169 bp

Genome Length

5078735 bp

Protein-coding Genes

4342 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinABT56_08485Not AvailableNegative1937917 - 19381899546.47
hemolysinABT56_08490Not AvailablePositive1938417 - 193947239210.8
branched-chain amino acid abc transporterABT56_08495Not AvailableNegative1939533 - 194084345830.6
hypothetical proteinABT56_08500Not AvailableNegative1941327 - 194191422625.1
2-ketoacid reductaseABT56_08505Not AvailablePositive1942012 - 194292633778.6
iclr family transcriptional regulatorABT56_08510Not AvailablePositive1942944 - 194355523330.4
uroporphyrinogen decarboxylaseABT56_08515Not AvailableNegative1943723 - 194479039464.7
nadh pyrophosphataseABT56_08520Not AvailableNegative1945015 - 194579128808.4
anti-rna polymerase sigma 70 factorABT56_08525Not AvailablePositive1945948 - 194643018230.5
dna-directed rna polymerase subunit beta'ABT56_08530Not AvailableNegative1946609 - 1950826155203.0

Displaying genes 1661 – 1670 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.