Photobacterium aquae strain CGMCC 1.12159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquae strain CGMCC 1.12159 is characterized by the presence of flagella, which suggests motility in aquatic environments. This trait is essential for the organism's ability to navigate and respond to its surroundings, potentially aiding in nutrient acquisition and colonization. Genetically, Photobacterium aquae strain CGMCC 1.12159 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession LDOT00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella and the singular replicon suggest that Photobacterium aquae strain CGMCC 1.12159 may be well-suited for survival in dynamic aquatic habitats, where mobility and genetic stability are advantageous. This adaptability can play a crucial role in its ecological interactions, including potential symbiotic relationships with other microorganisms or participation in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquae
Strainstrain CGMCC 1.12159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquae strain CGMCC 1.12159 contig0114, whole genome

Gene Summary

Adenine Count

1296295 bp

Thymine Count

1288539 bp

Guanine Count

1235732 bp

Cytosine Count

1258169 bp

Genome Length

5078735 bp

Protein-coding Genes

4342 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABT56_07195Not AvailablePositive1660736 - 166173735839.1
phage-shock proteinABT56_07200Not AvailablePositive1661847 - 166223314826.3
type iii effectorABT56_07205Not AvailablePositive1662327 - 166268613828.5
membrane proteinABT56_07210Not AvailableNegative1662753 - 166308512251.4
phosphoribosylglycinamide formyltransferaseABT56_07215Not AvailablePositive1663382 - 166417329331.2
phosphoribosylglycinamide formyltransferaseABT56_07220Not AvailablePositive1664443 - 166522829208.0
hypothetical proteinABT56_07225Not AvailablePositive1665397 - 166566310255.2
membrane proteinABT56_07230Not AvailableNegative1665768 - 166705444553.0
dna mismatch repair protein muttABT56_07235Not AvailableNegative1667548 - 166808720625.6
peptidaseABT56_07240Not AvailableNegative1668210 - 167047784745.5

Displaying genes 1411 – 1420 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.