Photobacterium aquae strain CGMCC 1.12159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquae strain CGMCC 1.12159 is characterized by the presence of flagella, which suggests motility in aquatic environments. This trait is essential for the organism's ability to navigate and respond to its surroundings, potentially aiding in nutrient acquisition and colonization. Genetically, Photobacterium aquae strain CGMCC 1.12159 possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various ecological niches. The strain is cataloged under the accession LDOT00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella and the singular replicon suggest that Photobacterium aquae strain CGMCC 1.12159 may be well-suited for survival in dynamic aquatic habitats, where mobility and genetic stability are advantageous. This adaptability can play a crucial role in its ecological interactions, including potential symbiotic relationships with other microorganisms or participation in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquae
Strainstrain CGMCC 1.12159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquae strain CGMCC 1.12159 contig0114, whole genome

Gene Summary

Adenine Count

1296295 bp

Thymine Count

1288539 bp

Guanine Count

1235732 bp

Cytosine Count

1258169 bp

Genome Length

5078735 bp

Protein-coding Genes

4342 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABT56_05135Not AvailableNegative1195974 - 119673227512.6
peptidase m23ABT56_05140Not AvailableNegative1196762 - 119791943590.4
phosphoglyceromutaseABT56_05145Not AvailableNegative1197928 - 119946955290.7
hypothetical proteinABT56_05150Not AvailablePositive1199895 - 120034416368.8
preprotein translocase subunit secbABT56_05155Not AvailablePositive1200468 - 120093817381.4
glycerol-3-phosphate dehydrogenaseABT56_05160Not AvailablePositive1200951 - 120196735866.1
serine acetyltransferaseABT56_05165Not AvailablePositive1202096 - 120291729346.4
rna methyltransferaseABT56_05170Not AvailableNegative1202992 - 120345617320.7
two-component sensor proteinABT56_05175Not AvailableNegative1203616 - 120497451042.7
transcriptional regulatorABT56_05180Not AvailableNegative1204974 - 120566325746.4

Displaying genes 1011 – 1020 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.