Stenotrophomonas daejeonensis strain JCM 16244

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas daejeonensis strain JCM 16244 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses flagella, which facilitate motility in its environment. It thrives optimally at a temperature of 29°C, categorizing it as mesophilic, with an ability to grow within a temperature range conducive for life in various ecological niches. The genome of Stenotrophomonas daejeonensis strain JCM 16244 comprises a single replicon, which is indicative of its genomic structure. Notably, this strain is non-spore-forming, suggesting that it relies on other survival strategies to withstand environmental stresses. The accession number for Stenotrophomonas daejeonensis strain JCM 16244 is LDJP00000000.1, which provides a reference for further genomic studies and biotechnological applications. In ecological contexts, the traits of Stenotrophomonas daejeonensis may contribute to its role in various habitats, particularly in nutrient cycling and interactions with other microorganisms. Its aerobic nature and rod shape may enable it to occupy niches where oxygen is available, potentially influencing microbial community dynamics. Understanding the specific ecological roles of this strain could aid in appreciating its contributions to environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas daejeonensis
Strainstrain JCM 16244

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas daejeonensis strain JCM 16244
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas daejeonensis strain JCM 16244 contig_124, whole

Gene Summary

Adenine Count

517713 bp

Thymine Count

514884 bp

Guanine Count

1126231 bp

Cytosine Count

1126031 bp

Genome Length

3284859 bp

Protein-coding Genes

2806 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding proteinABB34_12640Not AvailableNegative2824764 - 28249767822.65
hypothetical proteinABB34_12645Not AvailableNegative2825042 - 282569824519.3
rna polymerase sigma 70ABB34_12650Not AvailableNegative2825709 - 282620018603.5
rna helicaseABB34_12655Not AvailablePositive2826361 - 282830471078.2
diguanylate cyclaseABB34_12660Not AvailablePositive2828458 - 283012561708.7
pseudouridine synthaseABB34_12665Not AvailablePositive2830171 - 283089326756.6
membrane proteinABB34_12670Not AvailableNegative2830979 - 283189332212.3
beta-lactamaseABB34_12675Not AvailablePositive2832107 - 283364856124.6
multidrug abc transporter atp-binding proteinABB34_12680Not AvailablePositive2833830 - 283568367632.5
hypothetical proteinABB34_12685Not AvailableNegative2835907 - 283636515811.6

Displaying genes 2461 – 2470 of 2867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.