Stenotrophomonas daejeonensis strain JCM 16244

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas daejeonensis strain JCM 16244 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain possesses flagella, which facilitate motility in its environment. It thrives optimally at a temperature of 29°C, categorizing it as mesophilic, with an ability to grow within a temperature range conducive for life in various ecological niches. The genome of Stenotrophomonas daejeonensis strain JCM 16244 comprises a single replicon, which is indicative of its genomic structure. Notably, this strain is non-spore-forming, suggesting that it relies on other survival strategies to withstand environmental stresses. The accession number for Stenotrophomonas daejeonensis strain JCM 16244 is LDJP00000000.1, which provides a reference for further genomic studies and biotechnological applications. In ecological contexts, the traits of Stenotrophomonas daejeonensis may contribute to its role in various habitats, particularly in nutrient cycling and interactions with other microorganisms. Its aerobic nature and rod shape may enable it to occupy niches where oxygen is available, potentially influencing microbial community dynamics. Understanding the specific ecological roles of this strain could aid in appreciating its contributions to environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas daejeonensis
Strainstrain JCM 16244

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas daejeonensis strain JCM 16244
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas daejeonensis strain JCM 16244 contig_124, whole

Gene Summary

Adenine Count

517713 bp

Thymine Count

514884 bp

Guanine Count

1126231 bp

Cytosine Count

1126031 bp

Genome Length

3284859 bp

Protein-coding Genes

2806 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l20ABB34_08130Not AvailablePositive1782359 - 178271813355.7
phenylalanyl-trna synthetaseABB34_08135Not AvailablePositive1783011 - 178400636925.6
phenylalanyl-trna synthetaseABB34_08140Not AvailablePositive1784083 - 178646184643.0
integration host factor subunit alphaABB34_08145Not AvailablePositive1786489 - 178678811200.4
merr family transcriptional regulatorABB34_08150Not AvailablePositive1786769 - 178712513911.8
Trna-proNot AvailableNot AvailablePositive1787193 - 1787269Not Available
polysaccharide biosynthesis protein gumnABB34_08160Not AvailablePositive1787524 - 178854937387.8
hypothetical proteinABB34_08165Not AvailableNegative1788561 - 178961338722.4
preprotein translocase subunit tatcABB34_08175Not AvailablePositive1790120 - 179053316447.8
Trna-leuNot AvailableNot AvailablePositive1790629 - 1790715Not Available

Displaying genes 1581 – 1590 of 2867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.