Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | ABB29_03935 | P37443 | Positive | 905223 - 907610 | 86238.8 |
| biopolymer transporter exbb | ABB29_03940 | P72941 | Positive | 907613 - 908272 | 23660.4 |
| biopolymer transporter | ABB29_03945 | O67694 | Positive | 908280 - 908702 | 15385.6 |
| lipid transporter atp-binding/permease | ABB29_03950 | Q4UV65 | Positive | 908699 - 910471 | 64003.9 |
| tetraacyldisaccharide 4'-kinase | ABB29_03955 | B4SQP9 | Positive | 910468 - 911511 | 38227.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | ABB29_03960 | B2FK23 | Positive | 911504 - 912292 | 27623.7 |
| phosphotyrosine protein phosphatase | ABB29_03965 | Q55535 | Positive | 912289 - 912753 | 16909.1 |
| nhl repeat protein | ABB29_03970 | Not Available | Positive | 912779 - 914200 | 51072.0 |
| excinuclease abc subunit c | ABB29_03975 | B4SQQ3 | Positive | 914200 - 916080 | 68792.3 |
| hypothetical protein | ABB29_03980 | Not Available | Negative | 916251 - 916628 | 13608.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
