Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate lyase | ABB29_03170 | P44720 | Positive | 732280 - 733401 | 40083.8 |
| thymidylate kinase | ABB29_03175 | A4XST1 | Positive | 733398 - 734045 | 23981.5 |
| dna polymerase iii subunit delta' | ABB29_03180 | P52024 | Positive | 734042 - 735010 | 35059.8 |
| pilus assembly protein pilz | ABB29_03185 | Not Available | Positive | 735016 - 735369 | 12436.1 |
| 3-hydroxyacyl-coa dehydrogenase | ABB29_03190 | Q6D2L7 | Negative | 735471 - 737522 | 73497.9 |
| rna polymerase sigma factor rpoe | ABB29_03195 | Q06198 | Positive | 737747 - 738382 | 24197.6 |
| hypothetical protein | ABB29_03200 | Not Available | Positive | 738379 - 739326 | 32298.3 |
| peptidase s1 | ABB29_03205 | Q48EU9 | Positive | 739412 - 740956 | 53330.7 |
| elongation factor 4 | ABB29_03210 | B2SRY0 | Positive | 741113 - 742906 | 65965.7 |
| signal peptidase | ABB29_03215 | P26844 | Positive | 743038 - 743832 | 29864.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
