Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose transporter permease | ABB29_14065 | Q8X625 | Negative | 3175847 - 3177061 | 41667.4 |
| lysr family transcriptional regulator | ABB29_14070 | P76250 | Positive | 3177160 - 3178089 | 33927.6 |
| 2-methylcitrate dehydratase | ABB29_14075 | P77243 | Positive | 3178285 - 3179739 | 53396.7 |
| membrane protein | ABB29_14080 | Not Available | Positive | 3179946 - 3181031 | 38911.6 |
| hypothetical protein | ABB29_14085 | Not Available | Positive | 3181264 - 3181800 | 18177.6 |
| hypothetical protein | ABB29_14090 | O67444 | Positive | 3181908 - 3182651 | 27232.1 |
| 2-amino-3-ketobutyrate coa ligase | ABB29_14095 | P0AB78 | Negative | 3182682 - 3183908 | 44158.0 |
| hypothetical protein | ABB29_14100 | Not Available | Positive | 3184172 - 3184894 | 25896.5 |
| l-threonine 3-dehydrogenase | ABB29_14105 | Q4URI9 | Negative | 3184966 - 3185988 | 37003.0 |
| dipeptidyl-peptidase 7 | ABB29_14110 | Not Available | Positive | 3186146 - 3188314 | 78876.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
