Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolactonase | ABB29_12815 | Q01578 | Negative | 2899959 - 2901056 | 38831.0 |
| glucuronate isomerase | ABB29_12820 | Q3BMC5 | Negative | 2901116 - 2902540 | 53574.4 |
| 1,4-beta-xylanase | ABB29_12825 | Not Available | Negative | 2902588 - 2903583 | 37381.3 |
| membrane protein | ABB29_12830 | P0AA79 | Negative | 2903580 - 2904887 | 46831.8 |
| transporter | ABB29_12835 | P31435 | Positive | 2905366 - 2906850 | 54582.4 |
| alpha-n-arabinofuranosidase | ABB29_12840 | P49943 | Positive | 2906880 - 2907896 | 37930.3 |
| aldose epimerase | ABB29_12845 | Not Available | Positive | 2907886 - 2908728 | 31281.4 |
| hypothetical protein | ABB29_12850 | Not Available | Negative | 2908793 - 2909143 | 12468.2 |
| hypothetical protein | ABB29_12855 | Q7DJ60 | Positive | 2909507 - 2914075 | 145134.0 |
| hypothetical protein | ABB29_12860 | P0DJO6 | Positive | 2914093 - 2914887 | 28481.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
