Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase | ABB29_12765 | Q8X6J4 | Positive | 2881956 - 2884154 | 77757.9 |
| xylulokinase | ABB29_12770 | P44401 | Positive | 2884402 - 2885898 | 52844.7 |
| xylose isomerase | ABB29_12775 | Q4UNZ4 | Positive | 2885942 - 2887276 | 49651.3 |
| laci family transcriptional regulator | ABB29_12780 | P37947 | Negative | 2887383 - 2888444 | 38173.8 |
| alpha-glucuronidase | ABB29_12785 | B3PC73 | Positive | 2888641 - 2890779 | 78624.0 |
| 9-o-acetylesterase | ABB29_12790 | Q9HAT2 | Positive | 2890776 - 2892767 | 71894.3 |
| bifunctional d-altronate/d-mannonate dehydratase | ABB29_12795 | G7TAD9 | Positive | 2892788 - 2894062 | 47369.2 |
| xylan 1,4-beta-xylosidase | ABB29_12800 | Not Available | Positive | 2894090 - 2895769 | 62237.4 |
| glucan 1,4-alpha-glucosidase | ABB29_12805 | D5EY15 | Positive | 2895838 - 2898465 | 96457.7 |
| mannitol dehydrogenase | ABB29_12810 | P39160 | Positive | 2898480 - 2899934 | 52088.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
