Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter | ABB29_12345 | Not Available | Positive | 2787067 - 2787588 | 18268.4 |
| membrane protein | ABB29_12350 | P40800 | Positive | 2787592 - 2788872 | 44399.7 |
| laci family transcriptional regulator | ABB29_12355 | Q6LQB9 | Positive | 2788998 - 2790059 | 38379.2 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | ABB29_12360 | Q4V0C6 | Positive | 2790196 - 2791044 | 31074.7 |
| 3-ketoacyl-acp reductase | ABB29_12365 | P37769 | Positive | 2791105 - 2791863 | 26189.4 |
| rhamnogalacturonan acetylesterase | ABB29_12370 | Not Available | Positive | 2791865 - 2792986 | 40627.1 |
| hypothetical protein | ABB29_12375 | Not Available | Negative | 2793003 - 2793545 | 19557.2 |
| hypothetical protein | ABB29_12380 | Not Available | Negative | 2793594 - 2794031 | 17345.2 |
| haloacid dehalogenase | ABB29_12385 | Not Available | Negative | 2794272 - 2794997 | 26663.8 |
| hypothetical protein | ABB29_12390 | Not Available | Negative | 2795148 - 2795507 | 12397.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
