Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | ABB29_11710 | P0ADZ9 | Negative | 2670287 - 2670628 | 11757.9 |
| queuine trna-ribosyltransferase | ABB29_11715 | Q8PJL7 | Negative | 2670737 - 2671912 | 43389.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ABB29_11720 | Q5GZY2 | Negative | 2671990 - 2673072 | 39636.2 |
| lysine 6-aminotransferase | ABB29_11725 | B9ITF9 | Positive | 2673372 - 2674868 | 53912.1 |
| pyrophosphatase | ABB29_11730 | Q889M7 | Negative | 2675066 - 2675689 | 22507.1 |
| phytase | ABB29_11735 | Not Available | Negative | 2675689 - 2676825 | 40589.9 |
| tonb-dependent receptor | ABB29_11740 | Not Available | Negative | 2676838 - 2679381 | 94148.9 |
| uracil phosphoribosyltransferase | ABB29_11745 | Q4UVY0 | Positive | 2679567 - 2680202 | 22691.9 |
| hypothetical protein | ABB29_11750 | Not Available | Negative | 2680662 - 2681129 | 17716.4 |
| metallo-beta-lactamase | ABB29_11755 | O34760 | Negative | 2681710 - 2682600 | 32865.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
