Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | ABB29_11400 | Q4USQ7 | Positive | 2597562 - 2598119 | 20701.9 |
| udp diphosphate synthase | ABB29_11405 | Q8PMK9 | Positive | 2598128 - 2598886 | 27996.4 |
| phosphatidate cytidylyltransferase | ABB29_11410 | P0ABG2 | Positive | 2598883 - 2599722 | 29650.1 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | ABB29_11415 | Q3BVL0 | Positive | 2599724 - 2600926 | 41764.3 |
| zinc metalloprotease | ABB29_11420 | Q87EI0 | Positive | 2600994 - 2602355 | 48281.2 |
| membrane protein | ABB29_11425 | A8GID8 | Positive | 2602463 - 2604991 | 94179.2 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | ABB29_11430 | Q3BVL4 | Positive | 2605133 - 2606152 | 34883.6 |
| 3-hydroxyacyl-acp dehydratase | ABB29_11435 | Q2P4B6 | Positive | 2606152 - 2606616 | 17314.4 |
| udp-n-acetylglucosamine acyltransferase | ABB29_11440 | B4SQ11 | Positive | 2606613 - 2607401 | 27779.2 |
| lipid-a-disaccharide synthase | ABB29_11445 | Q3BVL7 | Positive | 2607410 - 2608621 | 43673.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
