Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | ABB29_10395 | B4SQR9 | Negative | 2364752 - 2365123 | 14086.7 |
| translation initiation factor if-2 | ABB29_10400 | Q3BRP5 | Negative | 2365138 - 2367810 | 95822.0 |
| transcription elongation factor nusa | ABB29_10405 | P0AFF8 | Negative | 2367907 - 2369418 | 55266.3 |
| ribosome maturation protein rimp | ABB29_10410 | Q3BRP3 | Negative | 2369427 - 2370062 | 22558.9 |
| Trna-met | Not Available | Not Available | Positive | 2370249 - 2370325 | Not Available |
| nadh:ubiquinone oxidoreductase subunit n | ABB29_10420 | Q3BRP2 | Negative | 2370388 - 2371866 | 51985.1 |
| nadh:ubiquinone oxidoreductase subunit m | ABB29_10425 | P50974 | Negative | 2371876 - 2373387 | 54528.4 |
| nadh:ubiquinone oxidoreductase subunit l | ABB29_10430 | Q9K1B0 | Negative | 2373421 - 2375553 | 78124.3 |
| nadh-quinone oxidoreductase subunit k | ABB29_10435 | Q8NL19 | Negative | 2375561 - 2375866 | 10874.9 |
| nadh:ubiquinone oxidoreductase subunit j | ABB29_10440 | P50975 | Negative | 2375863 - 2376525 | 23528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
