Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoisovalerate dehydrogenase | ABB29_08820 | P21874 | Negative | 2013214 - 2014251 | 37254.9 |
| pyruvate dehydrogenase | ABB29_08825 | P35485 | Negative | 2014260 - 2015336 | 39412.7 |
| hypothetical protein | ABB29_08830 | Not Available | Negative | 2015432 - 2015620 | 6467.51 |
| tryptophan 2,3-dioxygenase | ABB29_08835 | Q4UZJ5 | Positive | 2015745 - 2016632 | 34116.8 |
| dihydroorotate dehydrogenase | ABB29_08840 | Not Available | Positive | 2016818 - 2018320 | 54534.2 |
| marr family transcriptional regulator | ABB29_08845 | Not Available | Negative | 2018402 - 2018887 | 17933.6 |
| 4-hydroxyphenylpyruvate dioxygenase | ABB29_08850 | O06695 | Positive | 2019073 - 2020170 | 41165.6 |
| hypothetical protein | ABB29_08855 | Not Available | Positive | 2020205 - 2020714 | 18248.8 |
| homogentisate 1,2-dioxygenase | ABB29_08860 | Q4UZI9 | Positive | 2020762 - 2022054 | 47026.3 |
| hypothetical protein | ABB29_08865 | Not Available | Positive | 2022159 - 2022806 | 21997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
