Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine transporter atp-binding subunit | ABB29_08310 | P31134 | Negative | 1906325 - 1907413 | 40453.7 |
| spermidine/putrescine abc transporter substrate-binding protein | ABB29_08315 | Not Available | Negative | 1907539 - 1908666 | 40971.8 |
| spermidine/putrescine abc transporter substrate-binding protein | ABB29_08320 | P31133 | Negative | 1908756 - 1909868 | 39908.5 |
| aminotransferase | ABB29_08325 | Q9I6J2 | Negative | 1909981 - 1911345 | 50123.3 |
| hypothetical protein | ABB29_08330 | Not Available | Negative | 1911482 - 1911883 | 14683.4 |
| glutamine synthetase | ABB29_08335 | Not Available | Negative | 1911914 - 1913299 | 51381.2 |
| glutamine amidotransferase | ABB29_08340 | Q9HDV0 | Negative | 1913296 - 1914063 | 27479.1 |
| gamma-glutamylputrescine synthetase | ABB29_08345 | P78061 | Positive | 1914443 - 1915795 | 49509.7 |
| fad-dependent oxidoreductase | ABB29_08350 | P37906 | Positive | 1915792 - 1917081 | 47010.2 |
| mfs transporter | ABB29_08355 | P37643 | Negative | 1917100 - 1918371 | 45461.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
