Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | ABB29_08110 | Q4UX86 | Negative | 1868152 - 1869261 | 38763.9 |
| shikimate kinase | ABB29_08115 | B4SSA3 | Negative | 1869371 - 1869934 | 20199.2 |
| hypothetical protein | ABB29_08120 | Not Available | Positive | 1870028 - 1870231 | 7187.67 |
| kinase | ABB29_08125 | Not Available | Negative | 1870252 - 1871046 | 29366.5 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ABB29_08130 | Q8PI89 | Positive | 1871145 - 1871744 | 22511.4 |
| abc transporter substrate-binding protein | ABB29_08135 | O34805 | Positive | 1871787 - 1872596 | 29276.2 |
| hypothetical protein | ABB29_08140 | Not Available | Negative | 1872747 - 1873196 | 15808.7 |
| pyrroline-5-carboxylate reductase | ABB29_08145 | P22008 | Negative | 1873287 - 1874111 | 28456.0 |
| pyridoxal phosphate biosynthesis protein | ABB29_08150 | P67082 | Negative | 1874188 - 1874868 | 24587.8 |
| twitching motility protein pilt | ABB29_08155 | P24559 | Positive | 1874963 - 1876000 | 38640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
