Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-mannosidase | ABB29_05785 | Not Available | Negative | 1298622 - 1301042 | 88296.5 |
| tonb-dependent receptor | ABB29_05790 | Not Available | Negative | 1301227 - 1304328 | 112986.0 |
| alpha-1 2-mannosidase | ABB29_05795 | Not Available | Negative | 1304588 - 1307941 | 122416.0 |
| n-acylglucosamine 2-epimerase | ABB29_05800 | F2JVT6 | Negative | 1307934 - 1309214 | 49676.6 |
| beta-mannosidase | ABB29_05805 | I2C092 | Negative | 1309211 - 1311835 | 97408.2 |
| copper homeostasis protein cutc | ABB29_05810 | B0RQ55 | Negative | 1312124 - 1312873 | 26138.5 |
| n(4)-(beta-n-acetylglucosaminyl)-l-asparaginase | ABB29_05815 | Q47898 | Negative | 1312870 - 1313886 | 35727.5 |
| hypothetical protein | ABB29_05820 | Not Available | Positive | 1314169 - 1314912 | 27395.2 |
| hypothetical protein | ABB29_05825 | Not Available | Positive | 1315544 - 1316110 | 21487.2 |
| hypothetical protein | ABB29_05830 | Not Available | Negative | 1316314 - 1316733 | 15430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
