Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridylase | ABB29_05200 | Q3BTY6 | Negative | 1174035 - 1175153 | 40878.1 |
| 7,8-dihydro-8-oxoguanine-triphosphatase | ABB29_05205 | A7ZKS4 | Negative | 1175150 - 1175629 | 18129.3 |
| hypothetical protein | ABB29_05210 | Not Available | Negative | 1175657 - 1176130 | 16872.5 |
| clp protease clps | ABB29_05215 | Q4UUJ9 | Positive | 1176266 - 1176586 | 12077.6 |
| clp protease clpx | ABB29_05220 | P0ABI1 | Positive | 1176714 - 1178993 | 83042.8 |
| translation initiation factor if-1 | ABB29_05225 | Q8PL04 | Negative | 1179089 - 1179307 | 8376.27 |
| leucyl/phenylalanyl-trna--protein transferase | ABB29_05230 | Q3BTY0 | Negative | 1179394 - 1180164 | 27923.6 |
| tonb-dependent receptor | ABB29_05235 | A7ZUI6 | Negative | 1180316 - 1183159 | 101758.0 |
| hypothetical protein | ABB29_05240 | Not Available | Negative | 1183333 - 1184448 | 41833.6 |
| hypothetical protein | ABB29_05245 | Not Available | Negative | 1184445 - 1185713 | 44721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
