Alishewanella sp. WH16-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alishewanella

Description

Alishewanella sp. WH16-1 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain has been cataloged with the accession number LCWL00000000.1, indicating that it has been sequenced and described in a public database. The classification of Alishewanella sp. WH16-1 within the Alishewanella genus suggests it may be part of a group known for its versatility in various environments, including marine ecosystems. While specific ecological roles of this strain are not detailed, members of the Alishewanella genus are often associated with organic matter degradation and have been implicated in biogeochemical cycles in their habitats. The Gram-negative nature of Alishewanella sp. WH16-1 may also suggest certain physiological traits, such as the presence of an outer membrane that can provide resistance to some antibiotics and environmental stresses. This characteristic can be significant in understanding the bacterium's interactions within its ecological niche, including its potential roles in nutrient cycling or interactions with other microorganisms. In summary, Alishewanella sp. WH16-1 is a Gram-negative, rod-shaped bacterium with a single replicon and has been sequenced and cataloged for further study. Its ecological significance may be linked to its potential roles in marine environments and organic matter degradation, highlighting its importance in microbiological and ecological research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlishewanella
SpeciesAlishewanella sp. WH16-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alishewanella sp. WH16-1 contig50, whole genome shotgun sequence.

Gene Summary

Adenine Count

861034 bp

Thymine Count

868067 bp

Guanine Count

880809 bp

Cytosine Count

878957 bp

Genome Length

3488867 bp

Protein-coding Genes

3111 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorAAY72_14765Not AvailableNegative3132038 - 313289531407.8
glucose-6-phosphate dehydrogenaseAAY72_14770Not AvailablePositive3133198 - 313466755574.6
6-phosphogluconolactonaseAAY72_14775Not AvailablePositive3134669 - 313535824590.7
phosphogluconate dehydrataseAAY72_14780Not AvailablePositive3135368 - 313720064935.5
glucokinaseAAY72_14785Not AvailablePositive3137193 - 313816133877.0
keto-deoxy-phosphogluconate aldolaseAAY72_14790Not AvailablePositive3138165 - 313880922284.3
abc transporter atp-binding proteinAAY72_14795Not AvailablePositive3138965 - 314053958859.4
ferritinAAY72_14800Not AvailablePositive3140703 - 314117017305.8
histidine kinaseAAY72_14805Not AvailablePositive3141361 - 314220631488.0
malate dehydrogenaseAAY72_14810Not AvailablePositive3142264 - 314396162486.1

Displaying genes 2881 – 2890 of 3214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.