Alishewanella sp. WH16-1

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alishewanella

Description

Alishewanella sp. WH16-1 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which is a defining feature of its genomic structure. The strain has been cataloged with the accession number LCWL00000000.1, indicating that it has been sequenced and described in a public database. The classification of Alishewanella sp. WH16-1 within the Alishewanella genus suggests it may be part of a group known for its versatility in various environments, including marine ecosystems. While specific ecological roles of this strain are not detailed, members of the Alishewanella genus are often associated with organic matter degradation and have been implicated in biogeochemical cycles in their habitats. The Gram-negative nature of Alishewanella sp. WH16-1 may also suggest certain physiological traits, such as the presence of an outer membrane that can provide resistance to some antibiotics and environmental stresses. This characteristic can be significant in understanding the bacterium's interactions within its ecological niche, including its potential roles in nutrient cycling or interactions with other microorganisms. In summary, Alishewanella sp. WH16-1 is a Gram-negative, rod-shaped bacterium with a single replicon and has been sequenced and cataloged for further study. Its ecological significance may be linked to its potential roles in marine environments and organic matter degradation, highlighting its importance in microbiological and ecological research.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlishewanella
SpeciesAlishewanella sp. WH16-1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alishewanella sp. WH16-1 contig50, whole genome shotgun sequence.

Gene Summary

Adenine Count

861034 bp

Thymine Count

868067 bp

Guanine Count

880809 bp

Cytosine Count

878957 bp

Genome Length

3488867 bp

Protein-coding Genes

3111 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAAY72_12630Not AvailableNegative2677942 - 267846919314.2
septum formation inhibitor mafAAY72_12635Not AvailablePositive2678624 - 267922921659.2
had family hydrolaseAAY72_12640Not AvailableNegative2679212 - 267986223440.2
23s rrna pseudouridylate synthaseAAY72_12645Not AvailableNegative2679896 - 268084936216.1
ribonucleaseAAY72_12650Not AvailablePositive2681365 - 2684457112663.0
porinAAY72_12655Not AvailableNegative2684581 - 268575042835.9
acetyl-coa synthetaseAAY72_12660Not AvailablePositive2685959 - 268791471977.7
luxr family transcriptional regulatorAAY72_12665Not AvailablePositive2688027 - 268870124853.9
sodium:proline symporterAAY72_12670Not AvailableNegative2688742 - 2692290130838.0
membrane proteinAAY72_12675Not AvailablePositive2692449 - 26927129777.99

Displaying genes 2461 – 2470 of 3214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.