Candidatus Peregrinibacteria bacterium GW2011_GWC2_39_14

Kingdom

Phylum

Candidatus Peregrinibacteriota

Class

Order

Family

Genus

Description

Candidatus Peregrinibacteria bacterium GW2011_GWC2_39_14 is characterized by having a single replicon, which is indicative of its genomic structure. The organism is cataloged under the accession number LBWJ00000000.1, providing a reference for its genetic information and enabling further studies on its biology and phylogeny. As a member of the Candidatus category, this bacterium has not yet been fully classified, but its traits suggest potential ecological roles. The single replicon may reflect a streamlined genome, which could be advantageous for survival in specific environments, possibly pointing to a specialization in nutrient acquisition or stress response strategies. Understanding the genomic features of Candidatus Peregrinibacteria bacterium GW2011_GWC2_39_14 can provide insights into its ecological niche and interactions within microbial communities. Further research could elucidate its contributions to biogeochemical cycles or its relationships with other organisms, emphasizing the importance of studying such unclassified microorganisms in their natural habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Candidatus Peregrinibacteria bacterium GW2011_GWC2_39_14

Gene Summary

Adenine Count

412660 bp

Thymine Count

402124 bp

Guanine Count

247143 bp

Cytosine Count

262229 bp

Genome Length

1324263 bp

Protein-coding Genes

1247 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rpod subfamily rna polymerase sigma-70, rna polymerase primary sigma factorUT33_C0011G0096P33656Negative859936 - 86107243175.4
primase, dna primase proteinUT33_C0011G0097P33655Negative861086 - 86287967682.2
glycosyl transferase family protein, udp-n-acetylglucosamine:undecaprenyl-p n-acetylglucosaminyl 1-p transferaseUT33_C0011G0098O34753Negative862902 - 86395138022.6
trna pseudouridine synthase b, trna pseudouridine55 synthaseUT33_C0011G0099Q895J5Negative863976 - 86467425886.6
udp-n-acetylmuramyl-tripeptide synthetase, udp-n-acetylmuramoyl-l-alanyl-d-glutamate-2, 6-diaminopimelate ligaseUT33_C0011G0100Q5L0Y0Negative864690 - 86597648045.4
riboflavin biosynthesis protein ribf, riboflavin kinase / fmn adenylyltransferaseUT33_C0011G0101Not AvailableNegative865969 - 86632513432.0
exopolysaccharide biosynthesis family proteinUT33_C0011G0102Not AvailableNegative866327 - 86767951576.2
sigma 54 modulation protein/ribosomal protein s30eaUT33_C0011G0103P28368Negative867690 - 86822620594.7
triosephosphate isomerase, triosephosphate isomerase (tim)UT33_C0011G0104O74025Negative868282 - 86894122814.8
hypothetical proteinUT33_C0011G0105Not AvailableNegative869021 - 87043649256.5

Displaying genes 841 – 850 of 1289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

65 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001586ethyl (R)-3-hydroxybutanoateC6H12O3Chemical structure of ethyl (R)-3-hydroxybutanoateNot available
Average132.159Da
Monoisotopic132.078644246Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0002054(2R)-octan-2-olC8H18OChemical structure of (2R)-octan-2-olNot available
Average130.231Da
Monoisotopic130.1357652Da
BASm0002166(R)-1-phenylethanolC8H10OChemical structure of (R)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 65 metabolites

Health Effects

No health effects information available for this bacterium.