Vibrio sp. VPAP30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. VPAP30 is a bacterial strain characterized by the presence of a single replicon, which indicates a streamlined genetic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number LBLS00000000.1, signifying its inclusion in genomic databases, which aids in further research and identification. Vibrio species are often associated with aquatic environments and can play significant roles in marine ecosystems, including nutrient cycling and as pathogens in some cases. While specific ecological roles of Vibrio sp. VPAP30 are not detailed in the provided information, the single replicon structure suggests it may possess unique metabolic capabilities that allow it to thrive in specific niches or conditions. Understanding the genetic makeup of Vibrio sp. VPAP30 could provide insights into its ecological interactions and potential applications in biotechnology or environmental microbiology. Further research on this strain may uncover its specific roles in its native habitat, enhancing our knowledge of Vibrio biodiversity and its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. VPAP30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. VPAP30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. VPAP30 NODE_1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1429335 bp

Thymine Count

1437592 bp

Guanine Count

1177508 bp

Cytosine Count

1123478 bp

Genome Length

5167913 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor switch protein flinZX61_04890Not AvailableNegative1044381 - 104474913227.5
flagellar motor switch protein flimZX61_04895Not AvailableNegative1044749 - 104556430387.7
hypothetical proteinZX61_04900Not AvailablePositive1045939 - 104689835779.0
atpase aaaZX61_04905Not AvailablePositive1046901 - 104823549152.1
flagellar hook-basal body protein flieZX61_04910Not AvailablePositive1048249 - 104860512701.4
flagellar ms-ring proteinZX61_04915Not AvailablePositive1048609 - 105035763957.1
flagellar motor switch protein gZX61_04920Not AvailablePositive1050320 - 105133938427.0
flagellar assembly protein flihZX61_04925Not AvailablePositive1051345 - 105209727720.6
atp synthaseZX61_04930Not AvailablePositive1052090 - 105343648573.7
flagellar export protein flijZX61_04935Not AvailablePositive1053446 - 105388617458.1

Displaying genes 971 – 980 of 4618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.