Vibrio sp. VPAP30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. VPAP30 is a bacterial strain characterized by the presence of a single replicon, which indicates a streamlined genetic structure. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number LBLS00000000.1, signifying its inclusion in genomic databases, which aids in further research and identification. Vibrio species are often associated with aquatic environments and can play significant roles in marine ecosystems, including nutrient cycling and as pathogens in some cases. While specific ecological roles of Vibrio sp. VPAP30 are not detailed in the provided information, the single replicon structure suggests it may possess unique metabolic capabilities that allow it to thrive in specific niches or conditions. Understanding the genetic makeup of Vibrio sp. VPAP30 could provide insights into its ecological interactions and potential applications in biotechnology or environmental microbiology. Further research on this strain may uncover its specific roles in its native habitat, enhancing our knowledge of Vibrio biodiversity and its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. VPAP30
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. VPAP30
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. VPAP30 NODE_1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1429335 bp

Thymine Count

1437592 bp

Guanine Count

1177508 bp

Cytosine Count

1123478 bp

Genome Length

5167913 bp

Protein-coding Genes

4521 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylaseZX61_00440Not AvailableNegative79822 - 8088939339.6
nadh pyrophosphataseZX61_00445Not AvailableNegative81149 - 8193429284.3
anti-rna polymerase sigma 70 factorZX61_00450Not AvailablePositive82113 - 8260718555.0
dna-directed rna polymerase subunit beta'ZX61_00455Not AvailableNegative82893 - 87098155226.0
dna-directed rna polymerase subunit betaZX61_00460Not AvailableNegative87191 - 91219149757.0
50s ribosomal protein l7/l12ZX61_00465Not AvailableNegative91451 - 9181912228.6
50s ribosomal protein l10ZX61_00470Not AvailableNegative91877 - 9237117575.0
50s ribosomal protein l1ZX61_00475Not AvailableNegative92671 - 9337224707.9
50s ribosomal protein l11ZX61_00480Not AvailableNegative93377 - 9380514804.0
transcription antiterminator nusgZX61_00485Not AvailableNegative93989 - 9453720654.7

Displaying genes 91 – 100 of 4618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.