Bacilli bacterium VT-13-104

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Family

Genus

Description

Bacilli bacterium VT-13-104 is characterized by its singular replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptability. The organism is cataloged under the accession number LAZH00000000.1, which serves as a unique identifier for its genomic data in biological databases. This bacterium's single replicon can suggest a level of genomic stability and may influence its metabolic pathways and environmental interactions. The lack of additional replicons may imply a more straightforward regulatory mechanism in comparison to bacteria with multiple replicons, potentially affecting its response to environmental stresses. From a biological perspective, Bacilli bacterium VT-13-104 could play a role in its ecosystem, possibly influencing nutrient cycling or interacting with other microbial populations. Its genomic simplicity might allow it to occupy specific ecological niches or adapt quickly to changing conditions, making it a valuable organism for further study in microbial ecology and biotechnology applications. Understanding the traits of Bacilli bacterium VT-13-104 can provide insights into the evolution of bacterial genomes and their ecological roles.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacilli bacterium VT-13-104 contig080, whole genome shotgun

Gene Summary

Adenine Count

1148428 bp

Thymine Count

1143931 bp

Guanine Count

633340 bp

Cytosine Count

638872 bp

Genome Length

3564998 bp

Protein-coding Genes

3254 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
csab proteinWH51_11665Not AvailablePositive2384856 - 238593539890.9
hypothetical proteinWH51_11670Not AvailablePositive2385990 - 238649618836.8
rpir family transcriptional regulatorWH51_11675Q8RD36Positive2386696 - 238754431863.5
n-acetylmuramic acid-6-phosphate etheraseWH51_11680Q8ESL3Positive2387702 - 238858631659.4
pts sugar transporter subunit iicWH51_11685Q797S1Positive2388607 - 238998648509.7
cell surface proteinWH51_11690Not AvailablePositive2390054 - 239113641073.8
hypothetical proteinWH51_11695Not AvailableNegative2391426 - 23916538503.96
hypothetical proteinWH51_11700Not AvailableNegative2391902 - 239287037755.2
hypothetical proteinWH51_11705Not AvailableNegative2393273 - 239376119254.6
hypothetical proteinWH51_11710Not AvailableNegative2393939 - 239432214653.3

Displaying genes 2211 – 2220 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

192 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 192 metabolites

Health Effects

No health effects information available for this bacterium.