Leucobacter sp. Ag1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leucobacter

Description

Leucobacter sp. Ag1 is characterized by possessing a single replicon, indicating a streamlined genomic structure that may enhance its adaptability and efficiency in various environments. The accession number for Leucobacter sp. Ag1 is LAYO00000000.1, which provides a reference for further genetic and biological studies. Leucobacter species are known for their diverse ecological roles, often found in soil and various environmental niches. While specific traits of Leucobacter sp. Ag1 are not detailed in the provided information, the genus Leucobacter generally exhibits notable metabolic versatility. This adaptability allows them to thrive in different conditions, which can be crucial for their survival and ecological function. The presence of a single replicon in Leucobacter sp. Ag1 may suggest a simplified genetic regulation system, potentially making it a candidate for studying evolutionary adaptations in microbial populations. This characteristic could also imply that Leucobacter sp. Ag1 might play a significant role in nutrient cycling or soil health, contributing to the microbial community dynamics. In summary, Leucobacter sp. Ag1, with its single replicon and genetic reference, exemplifies the adaptability of the Leucobacter genus. Its ecological significance may be linked to its potential roles in environmental processes, although specific functions require further investigation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeucobacter
SpeciesLeucobacter sp. Ag1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucobacter sp. Ag1 JX03_contig_27, whole genome shotgun sequence.

Gene Summary

Adenine Count

527961 bp

Thymine Count

523552 bp

Guanine Count

1242594 bp

Cytosine Count

1242596 bp

Genome Length

3536703 bp

Protein-coding Genes

3006 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrofolate reductaseXM48_08840G9BIY1Positive1851378 - 185233132723.5
phosphomevalonate kinaseXM48_08845Q9KWG3Positive1852328 - 185342238858.8
isopentenyl pyrophosphate isomeraseXM48_08850Q9KWG2Positive1853412 - 185454539831.1
hydroxymethylglutaryl-coa reductaseXM48_08855O08424Positive1854601 - 185566837824.2
3-hydroxy-3-methylglutaryl-coa synthaseXM48_08860Q9FD71Positive1855665 - 185681040515.9
marr family transcriptional regulatorXM48_08865O34777Negative1856927 - 185738216516.3
hypothetical proteinXM48_08870Not AvailablePositive1857436 - 185770210142.0
hypothetical proteinXM48_08875Not AvailableNegative1857793 - 185831418836.7
hypothetical proteinXM48_08880Not AvailablePositive1858466 - 185896617441.7
membrane proteinXM48_08885Not AvailableNegative1858918 - 185979331548.0

Displaying genes 1661 – 1670 of 3079 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

216 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 216 metabolites

Health Effects

No health effects information available for this bacterium.