Nostoc linckia z16

Gram-negativeFilamentous

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Nostoc

Description

Nostoc linckia z16 is a Gram-negative, filamentous cyanobacterium characterized by its unique morphology and physiological attributes. This organism possesses flagella, which facilitates motility and possibly enhances its ability to colonize various environments. Nostoc linckia z16 has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in resource utilization. The accession number for this strain is LAHI00000000.1, which serves as a reference for further research and genomic studies. Ecologically, the filamentous structure of Nostoc linckia z16 suggests its potential role in forming mats or biofilms in aquatic systems. These formations can contribute to nutrient cycling and provide habitats for various microorganisms. The presence of flagella may also allow this cyanobacterium to navigate towards favorable conditions, such as light or nutrient-rich areas, enhancing its survival and proliferation in diverse environments. Overall, the traits of Nostoc linckia z16 highlight its adaptability and ecological significance in microbial communities.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusNostoc
SpeciesNostoc linckia
Strainz16

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Nostoc linckia z16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nostoc linckia z16 scaffold2729.1, whole genome shotgun sequence.

Gene Summary

Adenine Count

2915859 bp

Thymine Count

2919166 bp

Guanine Count

2045003 bp

Cytosine Count

2055023 bp

Genome Length

9936114 bp

Protein-coding Genes

8020 genes

Non-Coding Genes

116 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorVF13_12770Not AvailableNegative3029127 - 302989729218.2
hypothetical proteinVF13_12775Not AvailablePositive3030479 - 30307279993.74
glutaredoxinVF13_12780Not AvailableNegative3031036 - 303135912050.5
hypothetical proteinVF13_12785Not AvailableNegative3031489 - 30317469159.84
zn-dependent proteaseVF13_12790Not AvailableNegative3031998 - 303334450401.8
zn-dependent proteaseVF13_12795Not AvailableNegative3033485 - 303492452723.3
cysteinyl-trna synthetaseVF13_12800Not AvailableNegative3035067 - 303654256071.4
cobalamin biosynthesis protein cobwVF13_12805Not AvailablePositive3036820 - 303792641419.5
d-tyrosyl-trna(tyr) deacylaseVF13_12810Not AvailablePositive3038056 - 303850816693.2
photosystem ii reaction center protein psb28VF13_12815Not AvailablePositive3038729 - 303906712787.2

Displaying genes 2411 – 2420 of 8136 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.