Neisseria flavescens strain CNF seq0063

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria flavescens strain CNF seq0063 is a Gram-negative bacterium primarily found in the duodenum, which is the first section of the small intestine in humans (Homo sapiens). This strain is classified as an aerobe, indicating that it requires oxygen for its metabolic processes. Notably, Neisseria flavescens strain CNF seq0063 possesses flagella, which are whip-like structures that facilitate motility, allowing the bacterium to navigate its environment effectively. The genomic characterization of this strain reveals that it contains a single replicon, which is a unit of genetic material capable of independent replication. This trait is significant for understanding the genetic organization and stability of the organism. The accession number for this strain is LAEK00000000.1, which provides a reference for genomic data and further research. The presence of Neisseria flavescens in the duodenum suggests its potential role in the complex microbial ecosystem of the human gastrointestinal tract. As an aerobe, it may contribute to the metabolic processes within the oxygen-rich environment of the upper intestine. The study of such strains can enhance our understanding of gut microbiota dynamics and their implications for human health, including their potential role in digestion and nutrient absorption. Additionally, the motility provided by flagella might influence its interactions with other microbial species and host tissues, potentially impacting the overall microbial community structure and function in the duodenum.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria flavescens
Strainstrain CNF seq0063

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Neisseria flavescens strain CNF seq0063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatduodenum
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria flavescens strain CNF seq0063, whole genome shotgun

Gene Summary

Adenine Count

584287 bp

Thymine Count

599550 bp

Guanine Count

578396 bp

Cytosine Count

554388 bp

Genome Length

2316621 bp

Protein-coding Genes

1996 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a biosynthesis acyltransferaseTW91_1227Not AvailableNegative1531218 - 153214735838.1
glycosyl transferase, group 2 familyTW91_1228Not AvailableNegative1532152 - 153287727002.5
abc-transporter atp-binding proteinTW91_1229Not AvailableNegative1533024 - 153479067082.6
tonb-dependent receptor proteinTW91_1230Not AvailablePositive1535029 - 153733284363.6
peptidyl-prolyl cis-trans isomerase bTW91_1231Not AvailablePositive1537532 - 153809520503.7
putative trna-modifying protein ygfzTW91_1232Not AvailablePositive1538218 - 153907530807.8
dgtpaseTW91_1233Not AvailableNegative1539846 - 154089540718.9
alanine--trna ligaseTW91_1234Not AvailableNegative1541272 - 154389696347.4
putrescine-binding periplasmic proteinTW91_1235Not AvailablePositive1544148 - 154527841653.5
ubiquinone/menaquinone biosynthesis methyltransferase ubieTW91_1236Not AvailableNegative1545442 - 154644637882.5

Displaying genes 1371 – 1380 of 2049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.