Neisseria flavescens strain CD-NF3 seq0022

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria flavescens strain CD-NF3 seq0022 is a Gram-negative bacterium identified in the duodenum, highlighting its niche within the human gastrointestinal tract. This strain is classified as an aerobe, signifying its requirement for oxygen to survive and grow. Notably, it possesses flagella, which suggests motility that may aid its environmental adaptability and colonization within the host. The strain has a single replicon, indicating a streamlined genetic structure that may contribute to its efficiency in replication and potential interactions with the host's microbiome. N. flavescens is associated with Homo sapiens, reinforcing its relevance in human health and disease contexts. The genomic data for this strain is accessible under the accession number LAEJ00000000.1, which may serve as a resource for future studies exploring its biological functions and interactions within the human gut microbiome. Understanding N. flavescens strain CD-NF3 seq0022's habitat and characteristics can provide insights into its role in the gastrointestinal ecosystem. Its presence in the duodenum, combined with its aerobic nature and motility, suggests it may play a part in nutrient absorption or competition with other microbial species. This underscores the importance of studying such microorganisms to comprehend their contributions to human health and the dynamics of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria flavescens
Strainstrain CD-NF3 seq0022

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Neisseria flavescens strain CD-NF3 seq0022
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatduodenum
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria flavescens strain CD-NF3 seq0022, whole genome shotgun

Gene Summary

Adenine Count

601137 bp

Thymine Count

592640 bp

Guanine Count

558663 bp

Cytosine Count

580577 bp

Genome Length

2333017 bp

Protein-coding Genes

1969 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid-a-disaccharide synthaseTW90_1914Not AvailableNegative1155663 - 115683842677.3
acyl-(acyl-carrier-protein)-udp-n- acetylglucosamine o-acyltransferaseTW90_1915Not AvailableNegative1156999 - 115777528186.6
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase fabzTW90_1916Not AvailableNegative1157850 - 115829916616.5
udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferaseTW90_1917Not AvailableNegative1158373 - 115941336088.8
outer membrane protein, omph familyTW90_1918Not AvailableNegative1159515 - 115997017463.5
hypothetical proteinTW90_1919Not AvailableNegative1160017 - 11601364670.71
outer membrane protein assembly complex, yaet proteinTW90_1920Not AvailableNegative1160136 - 116253889291.3
rip metalloprotease rsepTW90_1921Not AvailableNegative1162542 - 116388248299.9
1-deoxy-d-xylulose 5-phosphate reductoisomeraseTW90_1922Not AvailableNegative1164015 - 116523243787.5
putative periplasmic proteinTW90_1923Not AvailableNegative1165314 - 116606327243.3

Displaying genes 961 – 970 of 2024 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.