Peptococcaceae bacterium BRH_c23 BRHa_1006413

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Peptococcaceae

Genus

Description

Peptococcaceae bacterium BRH_c23 BRHa_1006413 is a member of the Peptococcaceae family, characterized by a single replicon, which suggests a streamlined genomic organization. The complete genomic information for this bacterium is available under the accession LADV00000000.1. The Peptococcaceae family is known for its anaerobic, gram-positive bacteria, which play significant roles in various ecological niches, particularly in the degradation of organic matter. This specific strain, like its relatives, could contribute to biogeochemical cycles, including carbon and nitrogen cycles, by facilitating the breakdown of complex organic materials in anaerobic environments. The presence of only one replicon may indicate a specialized adaptation to its environment, allowing for efficient replication and maintenance of essential genomic functions without the complexity of multiple replicons. This trait could be advantageous in specific ecological contexts where resource availability is limited, enabling the bacterium to thrive in competitive anaerobic habitats. In summary, Peptococcaceae bacterium BRH_c23 BRHa_1006413 showcases traits typical of its family, including a single replicon and potential ecological roles in anaerobic environments, highlighting its importance in organic matter decomposition and nutrient cycling.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Peptococcaceae bacterium BRH_c23 BRHa_1006413, whole genome

Gene Summary

Adenine Count

1721432 bp

Thymine Count

1731501 bp

Guanine Count

1274258 bp

Cytosine Count

1300004 bp

Genome Length

6027195 bp

Protein-coding Genes

5037 genes

Non-Coding Genes

30 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane proteinVR66_22375Not AvailableNegative4738781 - 47388913543.69
n-6 dna methylaseVR66_22380P50840Negative4739200 - 474036344425.5
hypothetical proteinVR66_22385Not AvailableNegative4740512 - 474123427150.4
hypothetical proteinVR66_22390Not AvailableNegative4741255 - 474155411749.2
hypothetical proteinVR66_22405Not AvailableNegative4743670 - 47439128844.7
hup-type ni fe-hydrogenase cytochrome b subunitVR66_22410Not AvailablePositive4743949 - 474453922919.7
ni,fe-hydrogenase maturation factorVR66_22415P27649Positive4744542 - 474503617991.9
hydantoin utilization protein aVR66_22420Q43949Negative4745186 - 474586024833.1
hydrogenase nickel incorporation protein hypaVR66_22425B8G0K1Negative4745861 - 474620212572.3
spore protein alpha/betaVR66_22430Not AvailablePositive4746512 - 47467338378.85

Displaying genes 4011 – 4020 of 5067 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

280 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 280 metabolites

Health Effects

No health effects information available for this bacterium.