Pseudomonas fluorescens strain C3

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain C3 is a gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a heterotroph, deriving its energy from organic compounds while being strictly aerobic, necessitating oxygen for growth. This strain thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range. The bacterium is characterized by its free-living biotic relationship, indicating it does not rely on a host for survival. However, it has been associated with various hosts, including Homo sapiens, multiple metazoans, and several plant species such as Triticum aestivum, Solanum tuberosum, and Hordeum vulgare. This diversity in hosts suggests a broad ecological presence across different environments. Pseudomonas fluorescens strain C3 possesses one replicon and is surrounded by two membranes, typical of gram-negative bacteria. Its ability to inhabit multiple habitats highlights its ecological versatility, allowing it to adapt to various environmental conditions. Despite its free-living nature, Pseudomonas fluorescens strain C3 has been implicated in bacterial infections, indicating potential pathogenicity, particularly in animal hosts. This dual role as both a free-living organism and a potential pathogen underscores the ecological complexity of Pseudomonas fluorescens strain C3, reflecting its significance in both environmental microbiology and clinical contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain C3

Gene Summary

Adenine Count

1370077 bp

Thymine Count

1381324 bp

Guanine Count

1982575 bp

Cytosine Count

1970504 bp

Genome Length

6705574 bp

Protein-coding Genes

5843 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseVC34_16360O51924Negative3645448 - 364631432324.2
abc transporter atp-binding proteinVC34_16365Q98G42Negative3646317 - 364740840869.2
abc transporter atp-binding proteinVC34_16370Q13TV1Negative3647408 - 364850240819.4
fis family transcriptional regulatorVC34_16375P28614Positive3648927 - 365077768668.2
cysteinyl-trna synthetaseVC34_16380Q3KA28Negative3650950 - 365233251431.2
glutamate--trna ligaseVC34_16385Q87YQ1Negative3652350 - 365405064786.1
peptidylprolyl isomeraseVC34_16390P83221Positive3654328 - 365483118325.8
udp-2,3-diacylglucosamine hydrolaseVC34_16395Q3KA25Positive3654828 - 365558028202.3
multidrug resistance protein bVC34_16400Not AvailableNegative3655707 - 365723655132.2
hemolysin dVC34_16405P27303Negative3657442 - 365864743280.0

Displaying genes 3401 – 3410 of 6013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

393 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 393 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total