Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase nlhh | VPARA_08100 | Not Available | Negative | 848592 - 849569 | 34522.3 |
| alcohol dehydrogenase | VPARA_08110 | Not Available | Positive | 849639 - 850775 | 39986.4 |
| phage-related baseplate assembly protein | VPARA_08120 | Not Available | Positive | 850906 - 853248 | 86807.2 |
| hypothetical protein | VPARA_08130 | Not Available | Positive | 853259 - 853696 | 15925.2 |
| secreted effector protein pipb2 | VPARA_08140 | Not Available | Positive | 853733 - 856369 | 97109.5 |
| secreted effector protein pipb2 | VPARA_08150 | Not Available | Positive | 856366 - 857502 | 42035.3 |
| hypothetical protein | VPARA_08160 | Not Available | Positive | 857499 - 858254 | 26796.1 |
| hypothetical protein | VPARA_08170 | Not Available | Positive | 858275 - 858661 | 13459.7 |
| tripartite tricarboxylate transporter family receptor | VPARA_08180 | Not Available | Negative | 858674 - 859657 | 34569.0 |
| patatin-like phospholipase | VPARA_08190 | Not Available | Negative | 859749 - 860828 | 40336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
