Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lysine cyclodeaminase | VPARA_07600 | Not Available | Positive | 794875 - 795894 | 37332.0 |
| abc transporter, phosphonate, periplasmic substrate-binding protein | VPARA_07610 | Not Available | Positive | 795917 - 796723 | 28756.8 |
| tripartite tricarboxylate transporter family receptor | VPARA_07620 | Not Available | Positive | 796723 - 797694 | 33477.1 |
| hth-type transcriptional regulator srps | VPARA_07630 | Not Available | Positive | 797840 - 798574 | 25869.1 |
| glutamine-binding periplasmic protein precursor | VPARA_07640 | Not Available | Positive | 798625 - 799377 | 27257.0 |
| inner membrane amino-acid abc transporter permease protein yecs | VPARA_07650 | Not Available | Positive | 799390 - 800058 | 24145.5 |
| protein ves | VPARA_07660 | Not Available | Positive | 800094 - 800627 | 18962.4 |
| imidazolonepropionase | VPARA_07670 | Not Available | Positive | 800651 - 801901 | 43745.5 |
| 8-oxoguanine deaminase | VPARA_07680 | Not Available | Positive | 801898 - 803289 | 49464.5 |
| n-formylglutamate amidohydrolase | VPARA_07690 | Not Available | Positive | 803286 - 804101 | 29938.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
