Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative quorum-quenching lactonase ytnp | VPARA_06100 | Not Available | Negative | 643456 - 644349 | 34131.0 |
| nodulation protein d 2 | VPARA_06110 | Not Available | Positive | 644793 - 645734 | 34685.1 |
| major facilitator superfamily protein | VPARA_06120 | Not Available | Negative | 645864 - 647009 | 39145.9 |
| hth-type transcriptional regulator gltr | VPARA_06130 | Not Available | Negative | 647006 - 647881 | 31287.7 |
| nitronate monooxygenase | VPARA_06140 | Not Available | Positive | 647973 - 648968 | 35119.0 |
| integrase core domain protein | VPARA_06150 | Not Available | Negative | 648961 - 649809 | 32242.2 |
| transposase | VPARA_06160 | Not Available | Negative | 649806 - 650132 | 12529.1 |
| putative helicase | VPARA_06170 | Not Available | Negative | 650489 - 652345 | 67765.0 |
| hypothetical protein | VPARA_06180 | Not Available | Positive | 652659 - 653285 | 23162.6 |
| res domain protein | VPARA_06190 | Not Available | Positive | 653298 - 653930 | 23374.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
