Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lysine cyclodeaminase | VPARA_66760 | Not Available | Negative | 7035669 - 7036718 | 37912.7 |
| 2-aminoadipate transaminase | VPARA_66770 | Not Available | Negative | 7036879 - 7038321 | 53203.5 |
| 5-aminovalerate aminotransferase davt | VPARA_66780 | Not Available | Positive | 7038452 - 7039744 | 45448.6 |
| spermidine/putrescine import atp-binding protein pota | VPARA_66790 | Not Available | Positive | 7039768 - 7040862 | 39878.2 |
| spermidine/putrescine-binding periplasmic protein precursor | VPARA_66800 | Not Available | Positive | 7040915 - 7041943 | 37511.8 |
| putrescine transport system permease protein poth | VPARA_66810 | Not Available | Positive | 7041963 - 7043219 | 45476.5 |
| inner membrane abc transporter permease protein ydcv | VPARA_66820 | Not Available | Positive | 7043242 - 7044060 | 29457.7 |
| guanidinobutyrase | VPARA_66830 | Not Available | Positive | 7044076 - 7045032 | 33799.6 |
| succinate-semialdehyde dehydrogenase | VPARA_66840 | Not Available | Positive | 7045071 - 7046549 | 52610.1 |
| uvrabc system protein a | VPARA_66850 | Not Available | Negative | 7046589 - 7052342 | 208737.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
