Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion lipoprotein | VPARA_66560 | Not Available | Negative | 7011715 - 7012230 | 18865.8 |
| hypothetical protein | VPARA_66570 | Not Available | Positive | 7012361 - 7012765 | 14776.8 |
| fha domain protein | VPARA_66580 | Not Available | Positive | 7012809 - 7014785 | 68388.1 |
| serine/threonine phosphatase stp | VPARA_66590 | Not Available | Positive | 7014778 - 7015584 | 28855.7 |
| hypothetical protein | VPARA_66600 | Not Available | Negative | 7015607 - 7016002 | 13340.4 |
| hypothetical protein | VPARA_66610 | Not Available | Negative | 7016014 - 7016679 | 23601.3 |
| hypothetical protein | VPARA_66620 | Not Available | Negative | 7016619 - 7017656 | 38432.9 |
| secreted effector protein pipb2 | VPARA_66630 | Not Available | Negative | 7017724 - 7020261 | 92855.0 |
| hypothetical protein | VPARA_66640 | Not Available | Negative | 7020265 - 7020726 | 16565.4 |
| phage-related baseplate assembly protein | VPARA_66650 | Not Available | Negative | 7020738 - 7023083 | 86370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
