Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase medium chain | VPARA_63950 | Not Available | Negative | 6732949 - 6733800 | 29866.8 |
| caffeine dehydrogenase subunit alpha | VPARA_63960 | Not Available | Negative | 6733797 - 6736178 | 85591.5 |
| naphthalene 1,2-dioxygenase system ferredoxin subunit | VPARA_63970 | Not Available | Positive | 6736854 - 6737171 | 11464.6 |
| anthranilate 1,2-dioxygenase system ferredoxin--nad(+) reductase component | VPARA_63980 | Not Available | Positive | 6737168 - 6738421 | 43944.5 |
| salicylate 5-hydroxylase, large oxygenase component | VPARA_63990 | Not Available | Positive | 6738451 - 6739761 | 49711.1 |
| anthranilate 1,2-dioxygenase small subunit | VPARA_64000 | Not Available | Positive | 6739758 - 6740273 | 19317.3 |
| amidohydrolase | VPARA_64010 | Not Available | Positive | 6740291 - 6741286 | 36321.2 |
| 2,5-dihydroxypyridine 5,6-dioxygenase | VPARA_64020 | Not Available | Positive | 6741311 - 6742354 | 38030.6 |
| maleamate amidohydrolase | VPARA_64030 | Not Available | Positive | 6742351 - 6742992 | 22871.5 |
| leu/ile/val/thr-binding protein precursor | VPARA_64040 | Not Available | Positive | 6743073 - 6744251 | 42098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
