Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3mp dioxygenase mdo | VPARA_05600 | Not Available | Positive | 594449 - 595036 | 21608.5 |
| carboxymuconolactone decarboxylase family protein | VPARA_05610 | Not Available | Positive | 595123 - 595467 | 11642.8 |
| tripartite tricarboxylate transporter family receptor | VPARA_05620 | Not Available | Positive | 595885 - 596127 | 8503.54 |
| 3-mercaptopyruvate sulfurtransferase | VPARA_05630 | Not Available | Negative | 596378 - 597232 | 31375.6 |
| putative sulfate exporter pse | VPARA_05640 | Not Available | Negative | 597374 - 598324 | 33237.9 |
| fumarate reductase iron-sulfur subunit | VPARA_05650 | Not Available | Positive | 598793 - 599527 | 27057.2 |
| succinate dehydrogenase/fumarate reductase transmembrane subunit | VPARA_05660 | Not Available | Positive | 599529 - 599864 | 11960.3 |
| succinate dehydrogenase/fumarate reductase transmembrane subunit | VPARA_05670 | Not Available | Positive | 599861 - 600205 | 12674.9 |
| fumarate reductase flavoprotein subunit | VPARA_05680 | Not Available | Positive | 600207 - 601949 | 62855.2 |
| l(+)-tartrate dehydratase subunit alpha | VPARA_05690 | Not Available | Positive | 601963 - 602898 | 34535.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
