Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein yycf | VPARA_62550 | Not Available | Negative | 6592255 - 6593088 | 30242.4 |
| cadherin domain protein | VPARA_62560 | Not Available | Positive | 6593491 - 6597876 | 148451.0 |
| outer membrane protein tolc precursor | VPARA_62570 | Not Available | Positive | 6597949 - 6599283 | 46903.4 |
| alpha-hemolysin translocation atp-binding protein hlyb | VPARA_62580 | Not Available | Positive | 6599280 - 6601472 | 79040.3 |
| type i secretion system membrane fusion protein prse | VPARA_62590 | Not Available | Positive | 6601469 - 6602701 | 44889.9 |
| smpa / omla family protein | VPARA_62600 | Not Available | Positive | 6602757 - 6603200 | 16555.8 |
| hypothetical protein | VPARA_62610 | Not Available | Negative | 6603524 - 6603868 | 12514.8 |
| hypothetical protein | VPARA_62620 | Not Available | Negative | 6604004 - 6604525 | 19003.5 |
| hth-type transcriptional regulator dmlr | VPARA_62630 | Not Available | Negative | 6605167 - 6606048 | 31446.2 |
| phenolphthiocerol synthesis polyketide synthase type i pks15/1 | VPARA_62640 | Not Available | Positive | 6606152 - 6607090 | 32560.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
