Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase small subunit 1 | VPARA_60950 | Not Available | Negative | 6418135 - 6418770 | 23775.7 |
| 3-isopropylmalate dehydratase large subunit | VPARA_60960 | Not Available | Negative | 6418770 - 6420209 | 51028.1 |
| rhodocoxin reductase | VPARA_60970 | Not Available | Positive | 6420551 - 6421756 | 43291.9 |
| bacterial regulatory protein, luxr family | VPARA_60980 | Not Available | Positive | 6422434 - 6423282 | 30990.9 |
| phosphoserine phosphatase | VPARA_60990 | Not Available | Negative | 6423984 - 6424694 | 25377.9 |
| transcription-repair-coupling factor | VPARA_61000 | Not Available | Negative | 6424691 - 6428185 | 129719.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | VPARA_61010 | Not Available | Positive | 6428407 - 6429018 | 21491.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | VPARA_61020 | Not Available | Positive | 6429015 - 6429509 | 17165.8 |
| osmolarity sensor protein envz | VPARA_61030 | Not Available | Negative | 6429511 - 6430920 | 51795.3 |
| transcriptional regulatory protein ompr | VPARA_61040 | Not Available | Negative | 6430997 - 6431728 | 27160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
