Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | VPARA_60850 | Not Available | Positive | 6404967 - 6405854 | 32316.6 |
| 3-methylitaconate isomerase | VPARA_60860 | Not Available | Positive | 6405865 - 6407001 | 39323.1 |
| tripartite tricarboxylate transporter family receptor | VPARA_60870 | Not Available | Positive | 6407024 - 6407992 | 34003.4 |
| hth-type transcriptional regulator lutr | VPARA_60880 | Not Available | Positive | 6407995 - 6408708 | 26312.8 |
| putative methylisocitrate lyase | VPARA_60890 | Not Available | Positive | 6408721 - 6409587 | 30463.6 |
| alcohol dehydrogenase | VPARA_60900 | Not Available | Positive | 6409671 - 6410681 | 35383.6 |
| oxygen-dependent choline dehydrogenase | VPARA_60910 | Not Available | Positive | 6410702 - 6412369 | 60366.3 |
| alcohol dehydrogenase | VPARA_60920 | Not Available | Negative | 6412526 - 6413692 | 42079.6 |
| transposase is116/is110/is902 family protein | VPARA_60930 | Not Available | Positive | 6413867 - 6414985 | 40870.2 |
| hypothetical protein | VPARA_60940 | Not Available | Negative | 6415407 - 6417821 | 84375.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
