Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein kinase ubib | VPARA_59350 | Not Available | Negative | 6239409 - 6240974 | 59816.4 |
| hypothetical protein | VPARA_59360 | Not Available | Negative | 6240971 - 6241543 | 20861.8 |
| tim44-like domain protein | VPARA_59370 | Not Available | Negative | 6241592 - 6242602 | 34187.5 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | VPARA_59380 | Not Available | Negative | 6242637 - 6243368 | 26741.5 |
| hypothetical protein | VPARA_59390 | Not Available | Negative | 6243524 - 6243937 | 14656.2 |
| hit domain protein | VPARA_59400 | Not Available | Negative | 6243937 - 6244374 | 16026.3 |
| putative fad-linked oxidoreductase | VPARA_59410 | Not Available | Negative | 6244371 - 6248285 | 143752.0 |
| d-3-phosphoglycerate dehydrogenase | VPARA_59420 | Not Available | Negative | 6248369 - 6249685 | 47131.1 |
| sn-glycerol-3-phosphate-binding periplasmic protein ugpb precursor | VPARA_59430 | Not Available | Positive | 6249829 - 6251139 | 47622.6 |
| sn-glycerol-3-phosphate transport system permease protein ugpa | VPARA_59440 | Not Available | Positive | 6251238 - 6252119 | 32517.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
