Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | VPARA_58550 | Not Available | Negative | 6167251 - 6168462 | 42272.9 |
| quinate/shikimate dehydrogenase | VPARA_58560 | Not Available | Negative | 6168560 - 6169393 | 28958.1 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | VPARA_58570 | Not Available | Negative | 6169422 - 6170432 | 36609.5 |
| sialic acid trap transporter permease protein siat | VPARA_58580 | Not Available | Negative | 6170484 - 6171764 | 44842.4 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | VPARA_58590 | Not Available | Negative | 6171780 - 6172340 | 20294.9 |
| shikimate dehydrogenase | VPARA_58600 | Not Available | Negative | 6172383 - 6173306 | 32915.6 |
| hypothetical protein | VPARA_58610 | Not Available | Positive | 6173403 - 6173510 | 4104.88 |
| pca operon regulatory protein | VPARA_58620 | Not Available | Positive | 6173507 - 6174301 | 29013.2 |
| tripartite tricarboxylate transporter family receptor | VPARA_58630 | Not Available | Positive | 6174375 - 6175385 | 35572.8 |
| transcriptional regulatory protein tctd | VPARA_58640 | Not Available | Positive | 6175411 - 6176076 | 24707.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
