Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | VPARA_58050 | Not Available | Negative | 6113568 - 6114617 | 35739.3 |
| cobyric acid synthase | VPARA_58060 | Not Available | Negative | 6114614 - 6116053 | 51014.3 |
| putative efflux pump outer membrane protein ttgc precursor | VPARA_58070 | Not Available | Negative | 6116141 - 6117631 | 52374.7 |
| efflux pump membrane transporter bepe | VPARA_58080 | Not Available | Negative | 6117662 - 6120940 | 116748.0 |
| efflux pump periplasmic linker bepf | VPARA_58090 | Not Available | Negative | 6120981 - 6122231 | 44023.4 |
| carboxylesterase nlhh | VPARA_58100 | Not Available | Negative | 6122382 - 6123263 | 30590.5 |
| hth-type transcriptional regulator dmlr | VPARA_58110 | Not Available | Positive | 6123447 - 6124361 | 34096.9 |
| osmc-like protein | VPARA_58120 | Not Available | Negative | 6124378 - 6124854 | 17534.7 |
| inner membrane protein yohk | VPARA_58130 | Not Available | Negative | 6124896 - 6125627 | 25038.6 |
| holin-like protein cida | VPARA_58140 | Not Available | Negative | 6125624 - 6125977 | 12815.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
