Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative inner membrane transporter yeda | VPARA_53350 | Not Available | Negative | 5610930 - 5611853 | 31283.1 |
| tyrocidine synthase 3 | VPARA_53360 | Not Available | Negative | 5611846 - 5614887 | 107922.0 |
| d-amino acid dehydrogenase small subunit | VPARA_53370 | Not Available | Negative | 5614884 - 5616677 | 64451.1 |
| oligopeptide transport atp-binding protein oppf | VPARA_53380 | Not Available | Negative | 5616674 - 5617699 | 37358.7 |
| putative d,d-dipeptide transport atp-binding protein ddpd | VPARA_53390 | Not Available | Negative | 5617704 - 5618717 | 36109.3 |
| putative d,d-dipeptide transport system permease protein ddpc | VPARA_53400 | Not Available | Negative | 5618714 - 5619625 | 32300.3 |
| dipeptide transport system permease protein dppb | VPARA_53410 | Not Available | Negative | 5619622 - 5620599 | 35117.1 |
| hypothetical protein | VPARA_53420 | Not Available | Negative | 5620638 - 5621675 | 37044.7 |
| periplasmic dipeptide transport protein precursor | VPARA_53430 | Not Available | Negative | 5621672 - 5623264 | 57609.8 |
| melibiose operon regulatory protein | VPARA_53440 | Not Available | Positive | 5623434 - 5624309 | 32213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
