Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase b | VPARA_47680 | Not Available | Negative | 4988201 - 4988911 | 25885.4 |
| hydroxyacylglutathione hydrolase | VPARA_47690 | Not Available | Negative | 4988908 - 4990581 | 59896.4 |
| tripartite tricarboxylate transporter family receptor | VPARA_47700 | Not Available | Positive | 4990701 - 4991744 | 36826.1 |
| hth-type transcriptional regulatory protein gabr | VPARA_47710 | Not Available | Negative | 4991962 - 4993482 | 56140.4 |
| putative taurine dehydrogenase, small subunit | VPARA_47720 | Not Available | Positive | 4993601 - 4994020 | 14983.3 |
| putative taurine dehydrogenase, large subunit | VPARA_47730 | Not Available | Positive | 4994048 - 4995499 | 53525.7 |
| oligopeptide-binding protein appa precursor | VPARA_47740 | Not Available | Positive | 4995727 - 4997325 | 58110.3 |
| dipeptide transport system permease protein dppb | VPARA_47750 | Not Available | Positive | 4997337 - 4998311 | 34795.6 |
| dipeptide transport system permease protein dppc | VPARA_47760 | Not Available | Positive | 4998308 - 4999210 | 31795.7 |
| oligopeptide transport atp-binding protein oppd | VPARA_47770 | Not Available | Positive | 4999207 - 5000262 | 37988.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
