Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor yvoa | VPARA_46880 | Not Available | Positive | 4902148 - 4902930 | 28939.2 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | VPARA_46890 | Not Available | Positive | 4902948 - 4904150 | 43274.4 |
| high-affinity branched-chain amino acid transport system permease protein livh | VPARA_46900 | Not Available | Positive | 4904425 - 4905297 | 30428.4 |
| leucine/isoleucine/valine transporter permease subunit | VPARA_46910 | Not Available | Positive | 4905294 - 4906277 | 34200.4 |
| lipopolysaccharide export system atp-binding protein lptb | VPARA_46920 | Not Available | Positive | 4906270 - 4907031 | 26621.6 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | VPARA_46930 | Not Available | Positive | 4907028 - 4907738 | 25631.4 |
| tripartite tricarboxylate transporter family receptor | VPARA_46940 | Not Available | Positive | 4907788 - 4908744 | 33010.9 |
| 2,3-dimethylmalate dehydratase large subunit | VPARA_46950 | Not Available | Positive | 4908741 - 4910027 | 45525.7 |
| homoaconitase small subunit | VPARA_46960 | Not Available | Positive | 4910024 - 4910548 | 18617.6 |
| mmge/prpd family protein | VPARA_46970 | Not Available | Positive | 4910535 - 4911872 | 46217.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
