Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter family receptor | VPARA_43570 | Not Available | Negative | 4533170 - 4534168 | 34169.3 |
| hth-type transcriptional regulator gltc | VPARA_43580 | Not Available | Positive | 4534282 - 4535175 | 32208.3 |
| deoxyribose operon repressor | VPARA_43590 | Not Available | Negative | 4535240 - 4536028 | 28237.0 |
| deoxyribose-phosphate aldolase | VPARA_43600 | Not Available | Positive | 4536242 - 4537318 | 38437.5 |
| putative aldehyde dehydrogenase alda | VPARA_43610 | Not Available | Positive | 4537323 - 4539737 | 84468.5 |
| l-fucose mutarotase | VPARA_43620 | Not Available | Positive | 4539861 - 4540313 | 16613.1 |
| ribokinase | VPARA_43630 | Not Available | Positive | 4540318 - 4541262 | 31430.2 |
| ribose transport system permease protein rbsc | VPARA_43640 | Not Available | Positive | 4541277 - 4542329 | 36652.7 |
| autoinducer 2-binding protein lsrb precursor | VPARA_43650 | Not Available | Positive | 4542342 - 4543346 | 35502.8 |
| ribose import atp-binding protein rbsa | VPARA_43660 | Not Available | Positive | 4543358 - 4544944 | 57079.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
