Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase 1 | VPARA_42570 | Not Available | Negative | 4421414 - 4421935 | 19283.4 |
| lysm domain/bon superfamily protein | VPARA_42580 | Not Available | Positive | 4422096 - 4423316 | 44383.4 |
| hypothetical protein | VPARA_42590 | Not Available | Positive | 4423359 - 4424507 | 39554.2 |
| protein smg | VPARA_42600 | Not Available | Positive | 4424559 - 4425077 | 18899.3 |
| hypothetical protein | VPARA_42610 | Not Available | Negative | 4425089 - 4427482 | 86201.3 |
| protein-export membrane protein secf | VPARA_42620 | Not Available | Negative | 4427622 - 4428578 | 34964.8 |
| protein translocase subunit secd | VPARA_42630 | Not Available | Negative | 4428597 - 4430480 | 67638.2 |
| preprotein translocase subunit yajc | VPARA_42640 | Not Available | Negative | 4430582 - 4430860 | 9916.62 |
| 2-oxoacid ferredoxin oxidoreductase | VPARA_42650 | Not Available | Negative | 4431191 - 4434799 | 131769.0 |
| leucine-responsive regulatory protein | VPARA_42660 | Not Available | Positive | 4434980 - 4435456 | 17467.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
